Basic Information
LncRNA/CircRNA Name | CCAT1 |
Synonyms | NA |
Region | NA |
Ensemble | ENSG00000247844 |
Refseq | NR_108049 |
Classification Information
Regulatory Mechanism | Biological Function | Clinical Application | |||
---|---|---|---|---|---|
TF | Immune | Survival | |||
Enhancer | Apoptosis | apoptosis | Drug | ||
Variant | Cell Growth | Circulating | |||
MiRNA | EMT | Metastasis | |||
Methylation | Coding Ability | Recurrence |
Cancer&Entry Information
Cancer Name | Colon Cancer |
ICD-0-3 | C18 |
Methods | qRT-PCR, Western blotting etc. |
Sample | Sixty-seven colon cancer tissue samples, Human colonic neoplasm cell lines HCT 116, SW1417, HT-29, and KM12 and the human normal colonic epithelial cell line NCM460 |
Expression Pattern | down-regulated |
Function Description | CCAT1 in colon cancer tissues was higher than that in noncancer tissues, and the levels of CCAT1 in HCT 116, SW1417, HT-29, and KM12 cell lines were higher than those in the human normal colon epithelial NCM460 cell line. Moreover, the expression levels of CCAT1 were high in HCT 116/5-FU and HT-29/5-FU cell lines, whose apoptosis rates induced by 5-FU were lower than those in corresponding parental cells. The results of qRT-PCR and CCK-8 assay showed that enhancement of lncRNA CCAT1 expression levels in HCT 116 and HT-29 cell lines increased their IC50?of 5-FU and decreased their apoptosis rates. Meanwhile, siRNA-CCAT1 effectively inhibited the expression of CCAT1 and enhanced the 5-FU-sensitivity of HCT 116/5-FU and HT-29/5-FU, in which apoptosis rates were increased at the same time. |
Pubmed ID | 31039730 |
Year | 2019 |
Title | Downregulation of lncRNA CCAT1 Enhances 5-fluorouracil Sensitivity in Human Colon Cancer Cells |
External Links
Links for CCAT1 | GenBank HGNC NONCODE |
Links for Colon Cancer | OMIM COSMIC |