Basic Information
LncRNA/CircRNA Name | XIST |
Synonyms | NA |
Region | GRCh38_X:73820651-73852753 |
Ensemble | ENSG00000229807 |
Refseq | NR_001564 |
Classification Information
Regulatory Mechanism | Biological Function | Clinical Application | |||
---|---|---|---|---|---|
TF | Immune | T-cell | Survival | ||
Enhancer | Apoptosis | Drug | fludarabine | ||
Variant | Cell Growth | Circulating | 2 | ||
MiRNA | EMT | Metastasis | |||
Methylation | Coding Ability | Recurrence |
Cancer&Entry Information
Cancer Name | breast cancer |
ICD-0-3 | C50 |
Methods | Microarray, qPCR |
Sample | breast cancer tissues, cell lines (MCF7, ZR75-1, SKBR3, MDA-231, 231BrM) |
Expression Pattern | down-regulated |
Function Description | we profiled long noncoding RNAs in brain metastatic tumors from patients with breast cancer and found that the X-inactive-specific transcript (XIST) was significantly downregulated in these tissues. knockout of XIST in mice mammary glands accelerated primary tumor growth as well as metastases in the brain. Decreased expression of XIST stimulated epithelial-mesenchymal transition and activated c-Met via MSN-mediated protein stabilization, Loss of XIST also augmented secretion of exosomal miRNA-503, which triggered M1-M2 polarization of microglia. This M1-M2 conversion upregulated immune suppressive cytokines in microglia that suppressed T-cell proliferation. In addition, fludarabine was found to be highly selective for cells with low levels of XIST expression as it showed selective inhibition of 231BrM and SKBrM3 cells, compared with SKBR3, MCF7, and ZR75-1 cells, which have high levels of XIST. We also examined the relationship between miR-503 expression and relapse-free survival in patients with breast cancer using the GSE22220 database and found that a higher expression of miR-503 was negatively correlated with the relapse-free survival. |
Pubmed ID | 30026327 |
Year | 2018 |
Title | Loss of XIST in Breast Cancer Activates MSN-c-Met and Reprograms Microglia via Exosomal miRNA to Promote Brain Metastasis. |
External Links
Links for XIST | GenBank HGNC NONCODE |
Links for breast cancer | OMIM COSMIC |