Basic Information
LncRNA/CircRNA Name | VCAN-AS1 |
Synonyms | NA |
Region | GRCh38_5:83531352-83581320 |
Ensemble | ENSG00000249835 |
Refseq | NR_136215 |
Classification Information
Regulatory Mechanism | Biological Function | Clinical Application | |||
---|---|---|---|---|---|
TF | Immune | Survival | |||
Enhancer | Apoptosis | apoptosis | Drug | ||
Variant | Cell Growth | Circulating | |||
MiRNA | EMT | Metastasis | |||
Methylation | Coding Ability | Recurrence |
Cancer&Entry Information
Cancer Name | gastric cancer |
ICD-0-3 | C16 |
Methods | qPCR, Western blot, RIP |
Sample | Human GC cell lines (BGC-823, MGC-803, AGS, and SGC-7901) and the normal human gastric epithelium cell line GES-1, GC tissues and adjacent nontumor tissues |
Expression Pattern | up-regulated |
Function Description | a low level of VCAN-AS1 in normal gastric tissues through NCBI and UCSC, and that VCAN-AS1 upregulation in GC tissues was related to poor prognosis by TCGA. Furthermore, VCAN-AS1 was found markedly enhanced in GC tissues and cell lines, while its upregulation was related with clinical outcomes of GC patients. Besides this, silencing VCAN-AS1 represses cell proliferation, migration, and invasion but enhances apoptosis. More important, we discovered that VCAN-AS1 expression was negatively correlated with wild-type p53 levels in GC tissues and that p53 was negatively modulated by VCAN-AS1 in GC cells. Furthermore, p53 suppression reversed the repression of VCAN-AS1 silence on the biological processes of AGS cells. Intriguingly, we identified that both VCAN-AS1 and TP53 can bind with eIF4A3, one of the core proteins in the exon junction complex. Also, we confirmed that VCAN-AS1 negatively regulates TP53 expression by competitively binding with eIF4A3. |
Pubmed ID | 31637706 |
Year | 2019 |
Title | Long noncoding RNA VCAN-AS1 contributes to the progression of gastric cancer via regulating p53 expression |
External Links
Links for VCAN-AS1 | GenBank HGNC NONCODE |
Links for gastric cancer | OMIM COSMIC |