Basic Information
LncRNA/CircRNA Name | C5orf66-AS1 |
Synonyms | C5orf66-AS1, CTC-276P9.1, Epist |
Region | GRCh38_5:135038831-135040047 |
Ensemble | ENSG00000249082 |
Refseq | NR_105049 |
Classification Information
Regulatory Mechanism | Biological Function | Clinical Application | |||
---|---|---|---|---|---|
TF | Immune | Survival | |||
Enhancer | Apoptosis | Drug | |||
Variant | Cell Growth | Circulating | |||
MiRNA | EMT | Metastasis | |||
Methylation | Coding Ability | Recurrence |
Cancer&Entry Information
Cancer Name | gastric cardia cancer |
ICD-0-3 | C16.0 |
Methods | qPCR, Luciferase reporter assay etc. |
Sample | cell lines (MGC-803, BGC-823, HGC-27, SGC-7901, NCI-N87), gastric cardia tissues |
Expression Pattern | down-regulated |
Function Description | Downregulation and aberrant hypermethylation of C5orf66-AS1 have been detected in a limited several tumors. C5orf66-AS1 was significantly downregulated in GCA tissues and cell lines, and the expression level was associated with TNM stage, pathological differentiation, lymph node metastasis, and distant metastasis or recurrence. The expression level of C5orf66-AS1 was significantly increased in cancer cells after treated with 5-Aza-dC. Aberrant hypermethylation of the regions around the transcription start site of C5orf66-AS1 was more tumor specific and was associated with its expression. Sp1 may upregulate C5orf66-AS1 expression and CpG sites hypermethylation within the binding sites may abrogate Sp1 binding. In addition, C5orf66-AS1 inhibited gastric cancer cell proliferation and invasion, and the dysregulation and hypermethylation of the regions around the transcription start site of C5orf66-AS1 were associated with poorer GCA patients'survival. |
Pubmed ID | 29566283 |
Year | 2018 |
Title | Aberrant methylation-mediated downregulation of long noncoding RNA C5orf66-AS1 promotes the development of gastric cardia adenocarcinoma. |
External Links
Links for C5orf66-AS1 | GenBank HGNC NONCODE |
Links for gastric cardia cancer | OMIM COSMIC |