Basic Information
LncRNA/CircRNA Name | SNHG6 |
Synonyms | NA |
Region | GRCh38_8:66921684-66926398 |
Ensemble | ENSG00000245910 |
Refseq | NR_002599 |
Classification Information
Regulatory Mechanism | Biological Function | Clinical Application | |||
---|---|---|---|---|---|
TF | Immune | Survival | |||
Enhancer | Apoptosis | Drug | |||
Variant | Cell Growth | Circulating | |||
MiRNA | EMT | Metastasis | |||
Methylation | Coding Ability | Recurrence |
Cancer&Entry Information
Cancer Name | colorectal cancer |
ICD-0-3 | C19.9 |
Methods | qPCR, Western blot, in vitro knockdown, etc. |
Sample | Clinical CRC tissues, Human normal colon epithelial cell line (FHC) and human colorectal cancer cell lines (HT29, CaCO2, SW480, SW620, RKO, HCT116 and LoVo) |
Expression Pattern | up-regulated |
Function Description | TCGA data showed that SNHG6 was significantly upregulated in colorectal cancer samples in comparison with healthy data samples (P < 0.01). CRC patients with high levels of SNHG6 had a significantly shorter overall survival than those with low levels of SNHG6 (P = 0.0162). qRT-PCR confirmed that the expression of SNHG6 was significantly upregulated in CRC tissues and cell lines. Upregulation of SNHG6 expression induced RKO and HCT116 cell proliferation as well as RKO cell metastasis, while downregulation of SNHG6 expression supressed the proliferation and metastasis of RKO cells and tumor growth in vivo. UPF1 was upregulated and ZEB1 was decreased when SNHG6 knockdown, regulating the TGF-?/Smad pathway and inducing EMT respectively |
Pubmed ID | 30662328 |
Year | 2019 |
Title | LncRNA SNHG6 promotes proliferation, invasion and migration in colorectal cancer cells by activating TGF-?/Smad signaling pathway via targeting UPF1 and inducing EMT via regulation of ZEB1 |
External Links
Links for SNHG6 | GenBank HGNC NONCODE |
Links for colorectal cancer | OMIM COSMIC |