Basic Information
LncRNA/CircRNA Name | SNHG6 |
Synonyms | NA |
Region | GRCh38_8:66921684-66926398 |
Ensemble | ENSG00000245910 |
Refseq | NR_002599 |
Classification Information
Regulatory Mechanism | Biological Function | Clinical Application | |||
---|---|---|---|---|---|
TF | Immune | Survival | |||
Enhancer | Apoptosis | apoptosis | Drug | ||
Variant | Cell Growth | Circulating | |||
MiRNA | EMT | Metastasis | |||
Methylation | Coding Ability | Recurrence |
Cancer&Entry Information
Cancer Name | colorectal cancer |
ICD-0-3 | C19.9 |
Methods | qPCR, Western blot, Luciferase reporter assay, in vitro knockdown, RNAi, etc. |
Sample | CRC tissues, CRC cell lines (HT-29, HCT116, SW480, SW620, and CACO2) and NCM460 cell line |
Expression Pattern | up-regulated |
Function Description | SNHG6 was significantly upregulated in CRC tissues and cell lines, compared with normal tissues and normal colorectal epithelial cell line NCM460, respectively. High expression of SNHG6 was positively correlated with tumor size, advanced TNM stage, and distant metastasis. Survival analyses revealed that SHNG6 was significantly associated with poor clinical outcomes and could serve as an independent prognostic factor. Loss-of-function studies demonstrated that SNHG6 knockdown inhibited CRC cell proliferation, induced G0/G1 arrest, promoted apoptosis, suppressed CRC cell migration and invasion, and restrained tumor growth. Mechanistic investigations showed that SNHG6 acted as a competing endogenous RNA for miR-181a-5p and attenuated the inhibitory effect of miR-181a-5p on E2F5. |
Pubmed ID | 30666158 |
Year | 2019 |
Title | Long noncoding RNA SNHG6 functions as a competing endogenous RNA by sponging miR-181a-5p to regulate E2F5 expression in colorectal cancer |
External Links
Links for SNHG6 | GenBank HGNC NONCODE |
Links for colorectal cancer | OMIM COSMIC |