Basic Information
LncRNA/CircRNA Name | SNHG16 |
Synonyms | NA |
Region | GRCh38_17:76557766-76565348 |
Ensemble | ENSG00000163597 |
Refseq | NR_038108 |
Classification Information
Regulatory Mechanism | Biological Function | Clinical Application | |||
---|---|---|---|---|---|
TF | Immune | Survival | |||
Enhancer | Apoptosis | apoptosis | Drug | ||
Variant | Cell Growth | Circulating | |||
MiRNA | EMT | Metastasis | |||
Methylation | Coding Ability | Recurrence |
Cancer&Entry Information
Cancer Name | retinoblastoma |
ICD-0-3 | C69.2 |
Methods | qPCR, Luciferase reporter assay, in vitro knockdown, RIP |
Sample | Human retinal epithelial cells ARPE-19 and two human RB cell lines WERI Rb1, SO-RB-50 and Y79, The human retinoblastoma cell line SO-Rb50, RB tissues and normal retinas |
Expression Pattern | up-regulated |
Function Description | SNHG16 expression was upregulated in RB tissues and cell lines compared with normal controls. Knockdown of SNHG16 in RB cells significantly inhibited the proliferation and colony formation, and promoted apoptosis in vitro, as well as retarded tumor growth in vivo. Mechanistic investigation illustrated that SNHG16 acted as a sponge for miR-140-5p and regulated its expression in RB cells. Clinical evidence revealed a negative correlation between SNHG16 and miR-140-5p in RB specimens. Rescue experiments showed that inhibition of miR-140-5p partially attenuated the growth-suppressing effects of SNHG16-depletion on RB cells.. |
Pubmed ID | 31234025 |
Year | 2019 |
Title | Long noncoding RNA SNHG16 promotes human retinoblastoma progression via sponging miR-140-5p |
External Links
Links for SNHG16 | GenBank HGNC NONCODE |
Links for retinoblastoma | OMIM COSMIC |