Basic Information
LncRNA/CircRNA Name | SNHG16 |
Synonyms | NA |
Region | GRCh38_17:76557766-76565348 |
Ensemble | ENSG00000163597 |
Refseq | NR_038108 |
Classification Information
Regulatory Mechanism | Biological Function | Clinical Application | |||
---|---|---|---|---|---|
TF | Immune | Survival | |||
Enhancer | Apoptosis | apoptosis | Drug | ||
Variant | Cell Growth | Circulating | |||
MiRNA | EMT | Metastasis | |||
Methylation | Coding Ability | Recurrence |
Cancer&Entry Information
Cancer Name | esophageal squamous cell carcinoma |
ICD-0-3 | NA |
Methods | qPCR, Western blot, Luciferase reporter assay, in vitro knockdown |
Sample | esophageal squamous cell cancer tissues, cell lines(TE-13, TE-1, EC-1 and Eca-109) |
Expression Pattern | up-regulated |
Function Description | We observed that SNHG16 expression levels were significantly upregulated in ESCC tissues and cell lines compared with the corresponding normal tissues and normal esophageal cell line, respectively. In addition, increased expression of SNHG16 were strongly linked to tumor stage (p = 0.019), lymph nodes metastasis (p = 0.007) and clinical stage (p = 0.026). Kaplan-Meier assay showed that the survival time of patients with high SNHG16 expression was significantly shorter than those with low SNHG16 expression (p = 0.0017). Univariate and multivariate analyses showed that high SNHG16 expression in ESCC was an independent predictor of poor survival. Loss-of-function experiments revealed that knockdown of SNHG16 suppressed proliferation and invasion and induced apoptosis of ESCC cells. Mechanistically, Wnt/?-catenin signaling pathways were actively modulated by SNHG16 in ESCC cells. |
Pubmed ID | 29949155 |
Year | 2018 |
Title | LncRNA SNHG16 Predicts Poor Prognosis in ESCC and Promotes Cell Proliferation and Invasion by Regulating Wnt/?-catenin Signaling Pathway |
External Links
Links for SNHG16 | GenBank HGNC NONCODE |
Links for esophageal squamous cell carcinoma | OMIM COSMIC |