Basic Information
LncRNA/CircRNA Name | PANDA |
Synonyms | NA |
Region | GRCh38_6:36673621-36675126 |
Ensemble | ENSG00000281450 |
Refseq | NR_109836 |
Classification Information
Regulatory Mechanism | Biological Function | Clinical Application | |||
---|---|---|---|---|---|
TF | Immune | Survival | |||
Enhancer | Apoptosis | apoptosis | Drug | ||
Variant | Cell Growth | Circulating | |||
MiRNA | EMT | Metastasis | |||
Methylation | Coding Ability | Recurrence |
Cancer&Entry Information
Cancer Name | esophageal squamous cancer |
ICD-0-3 | C15 |
Methods | qPCR, Western blot, in vitro knockdown, RNAi, RIP, etc. |
Sample | ESCC (TNM Stage 0 to IV), ESCC cell lines (KYSE30, KYSE70, KYSE140, KYSE150, KYSE180, KYSE450, KYSE510, 9706, Eca109), Esophageal Epithelial Cells Het1A |
Expression Pattern | up-regulated |
Function Description | Higher expression of PANDA in ESCC tissues was associated with TNM stage, advanced clinical stage, and shorter overall survival of ESCC patients by MTT, EDU, colony formation assay and flow cytometry in KYSE180 and KYSE450 cells. Exogenous down-regulation of PANDA expression significantly suppressed ESCC cells proliferation and colony formation by arresting G1-S checkpoint transition in vitro, and retarded the development of tumors in vivo. Meanwhile, qRT-PCR and western blot assays showed that depletion of PANDA reduced E2F1, cyclinD1, cyclinD2, cyclinE1 and Bcl-2 expression. RIP showed the interaction between PANDA and NF-YA or SAFA. Our findings suggested that, PANDA drifted away from NF-YA to promote the expression of NF-YA-E2F1 co-regulated proliferation-promoting genes, and to limit the cell apoptosis. In addition, PANDA binds SAFA to switch on the tumor proliferation program through CyclinD1/2-Cyclin E1 and Bcl-2 pathways. PANDA could serve as a potential prognostic biomarker and therapeutic target for ESCC. |
Pubmed ID | 31495606 |
Year | 2019 |
Title | Long noncoding RNA PANDA promotes esophageal squamous carcinoma cell progress by dissociating from NF-YA but interact with SAFA |
External Links
Links for PANDA | GenBank HGNC NONCODE |
Links for esophageal squamous cancer | OMIM COSMIC |