Basic Information
LncRNA/CircRNA Name | B3GALT5-AS1 |
Synonyms | NA |
Region | GRCh38_21:39597147-39612821 |
Ensemble | ENSG00000184809 |
Refseq | NR_026542 |
Classification Information
Regulatory Mechanism | Biological Function | Clinical Application | |||
---|---|---|---|---|---|
TF | Immune | Survival | |||
Enhancer | Apoptosis | Drug | |||
Variant | Cell Growth | Circulating | |||
MiRNA | EMT | Metastasis | |||
Methylation | Coding Ability | Recurrence |
Cancer&Entry Information
Cancer Name | colon cancer |
ICD-0-3 | C18 |
Methods | qPCR, Western blot, Luciferase reporter assay, in vitro knockdown, etc. |
Sample | primary colon cancer tissues, human normal colonic epithelial cell line NCM460 and colon cancer cell lines HCT116,HT-29,LoVo,SW480 and SW620 |
Expression Pattern | down-regulated |
Function Description | identified a novel lncRNA B3GALT5-AS1, which is reduced in colon cancer tissues and further reduced in colon cancer liver metastasis tissues. Reduced expression of B3GALT5-AS1 is associated with liver metastasis and poor outcome of colon cancer patients. Gain-of-function and loss-offunction assays revealed that B3GALT5-AS1 inhibited proliferation but promoted migration and invasion of colon cancer cells. Further investigation revealed that B3GALT5-AS1 directly bound to the promoter of miRNA203, repressed miR-203 expression, upregulated miR-203 targets ZEB2 and SNAI2, and induced epithelial-tomesenchymal transition (EMT). In vivo study revealed that B3GALT5-AS1 suppressed colon cancer liver metastasis via its binding on miR-203 promoter and the repression of miR-203. miR-203 is increased and epithelial phenotype is preferred in colon cancer liver metastasis tissues. Collectively, our data revealed the suppressive roles of B3GALT5-AS1/miR-203/EMT regulation axis in colon cancer liver metastasis. Our data suggested that the activating B3GALT5-AS1/miR-203/EMT axis may be potential therapeutic strategy for colon cancer liver metastasis. |
Pubmed ID | 30530918 |
Year | 2018 |
Title | Long noncoding RNA B3GALT5-AS1 suppresses colon cancer liver metastasis via repressing microRNA-203 |
External Links
Links for B3GALT5-AS1 | GenBank HGNC NONCODE |
Links for colon cancer | OMIM COSMIC |