Basic Information
LncRNA/CircRNA Name | LINC00152 |
Synonyms | CYTOR, C2orf59, LINC00152, NCRNA00152 |
Region | GRCh38_2:87454781-87636740 |
Ensemble | ENSG00000222041 |
Refseq | NR_024204 |
Classification Information
Regulatory Mechanism | Biological Function | Clinical Application | |||
---|---|---|---|---|---|
TF | Immune | Survival | |||
Enhancer | Apoptosis | Drug | |||
Variant | Cell Growth | Circulating | |||
MiRNA | EMT | Metastasis | |||
Methylation | Coding Ability | Recurrence |
Cancer&Entry Information
Cancer Name | glioblastoma |
ICD-0-3 | NA |
Methods | qPCR, Western blot, in vitro knockdown |
Sample | glioblastoma cell lines (U87) |
Expression Pattern | up-regulated |
Function Description | It is determined that LINC00152/CYTOR is upregulated in glioblastoma multiforme (GBM) and aggressive wild-type IDH1/2 grade 2/3 gliomas and upregulation associates with poor patient outcomes. Inhibition of the mostly cytoplasmic LINC00152 decreases, and overexpression increases cellular invasion. LINC00152 knockdown alters the transcription of genes important to epithelial-to-mesenchymal transition (EMT). PARIS and Ribo-seq data, together with secondary structure prediction, identified a protein-bound 121-bp stem-loop structure at the 3' end of LINC00152 whose overexpression is sufficient to increase invasion of GBM cells. Point mutations in the stem-loop suggest that stem formation in the hairpin is essential for LINC00152 function. LINC00152 has a nearly identical homolog, MIR4435-2HG, which encodes a near identical hairpin, is equally expressed in low-grade glioma (LGG) and GBM, predicts poor patient survival in these tumors, and is also reduced by LINC00152 knockdown. Together, these data reveal that LINC00152 and its homolog MIR4435-2HG associate with aggressive tumors and promote cellular invasion through a mechanism that requires the structural integrity of a hairpin structure. |
Pubmed ID | 29991527 |
Year | 2018 |
Title | LINC00152 Promotes Invasion Through a 3'-Hairpin Structure and Associates With Prognosis in Glioblastoma |
External Links
Links for LINC00152 | GenBank HGNC NONCODE |
Links for glioblastoma | OMIM COSMIC |