Basic Information
LncRNA/CircRNA Name | IQCJ-SCHIP1-AS1 |
Synonyms | NA |
Region | GRCh38_3:159765387-159768612 |
Ensemble | ENSG00000241211 |
Refseq | NR_121669 |
Classification Information
Regulatory Mechanism | Biological Function | Clinical Application | |||
---|---|---|---|---|---|
TF | Immune | Survival | |||
Enhancer | Apoptosis | apoptosis | Drug | ||
Variant | Cell Growth | Circulating | |||
MiRNA | EMT | Metastasis | |||
Methylation | Coding Ability | Recurrence |
Cancer&Entry Information
Cancer Name | colorectal cancer |
ICD-0-3 | C19.9 |
Methods | RNA-seq, qPCR |
Sample | The CRC cell lines, HT29, LoVo, HCT116, and SW480, CRC tissues and adjacent NCTs |
Expression Pattern | down-regulated |
Function Description | More than 2-fold decreased expression of IQCJ-SCHIP1-AS1 was found in half of CRC tissues (53.5%, 46/86). IQCJ-SCHIP1-AS1 down-regulation was correlated with poor differentiation (P=0.025), advanced depth of tumor (P=0.022), lymphatic invasion (P=0.010), advanced tumor stage (P=0.006), and poor prognosis (P=0.0027) in CRC patients. The Cox proportional hazards model demonstrated that IQCJSCHIP1-AS1 expression was an independent prognostic factor for CRC (HR =0.247, 95% CI: 0.081- 0.752, P=0.014). Moreover, knockdown of IQCJ-SCHIP1-AS1 promoted CRC cell proliferation through increasing cell cycle progression and impairing cell apoptosis. Additionally, bioinformatics analysis showed that differential expression genes in IQCJ-SCHIP1-AS1-depleted CRC cells were enriched in the pathways of cell cycle, DNA replication, and p53. |
Pubmed ID | 31205916 |
Year | 2019 |
Title | Long non-coding RNA IQCJ-SCHIP1 antisense RNA 1 is downregulated in colorectal cancer and inhibits cell proliferation |
External Links
Links for IQCJ-SCHIP1-AS1 | GenBank HGNC NONCODE |
Links for colorectal cancer | OMIM COSMIC |