Basic Information
LncRNA/CircRNA Name | HOTAIR |
Synonyms | NA |
Region | GRCh38_12:53962308-53974956 |
Ensemble | ENSG00000228630 |
Refseq | NR_003716 |
Classification Information
Regulatory Mechanism | Biological Function | Clinical Application | |||
---|---|---|---|---|---|
TF | Immune | Survival | |||
Enhancer | Apoptosis | Drug | |||
Variant | Cell Growth | Circulating | |||
MiRNA | EMT | Metastasis | |||
Methylation | Coding Ability | Recurrence |
Cancer&Entry Information
Cancer Name | gastric cancer |
ICD-0-3 | C16 |
Methods | qPCR, Western blot |
Sample | GC cell lines AGS, MGC-803, SGC-7901, BGC-823, and a normal gastric epithelium cell line GES-1, GC tissue samples and matched adjacent normal tissues |
Expression Pattern | up-regulated |
Function Description | Te expression levels of HOTAIR were signifcantly upregulated in GC tissues and cell lines. Increased HOTAIR was associated with tumor diferentiation, lymph node and distant metastasis, and clinical stage. Furthermore, the area under the ROC curve (AUC) was up to 0.8416 (95 % CI=0.7661 to 0.9170, P<0.0001). Te sensitivity and specifcity were 66.67 and 87.04%, respectively. Te correlation between HOTAIR expression and overall survival (OS) was statistically signifcant. Te hazard ratio was 2.681, and 95% CI of ratio was 1.370 to 5.248. In addition, knockdown of HOTAIR can inhibit GC cell growth and afect cell cycle distribution. And knockdown of HOTAIR could enhance the protein levels of P21 and P53. |
Pubmed ID | 31281667 |
Year | 2019 |
Title | The Association of HOTAIR with the Diagnosis and Prognosis of Gastric Cancer and Its Effect on the Proliferation of Gastric Cancer Cells |
External Links
Links for HOTAIR | GenBank HGNC NONCODE |
Links for gastric cancer | OMIM COSMIC |