Basic Information
LncRNA/CircRNA Name | HOTAIR |
Synonyms | NA |
Region | GRCh38_12:53962308-53974956 |
Ensemble | ENSG00000228630 |
Refseq | NR_003716 |
Classification Information
Regulatory Mechanism | Biological Function | Clinical Application | |||
---|---|---|---|---|---|
TF | Immune | Survival | |||
Enhancer | Apoptosis | Drug | |||
Variant | Cell Growth | Circulating | |||
MiRNA | EMT | Metastasis | |||
Methylation | Coding Ability | Recurrence |
Cancer&Entry Information
Cancer Name | colon cancer |
ICD-0-3 | C18 |
Methods | qPCR, Luciferase reporter assay |
Sample | The human colon cancer cell lines (HT29, HCT8, HCT-116) and the normal human intestinal epithelial cell line FHC, colon tissues and corresponding adjacent non-tumor tissues |
Expression Pattern | up-regulated |
Function Description | HOTAIR expression in colon cancer was significantly higher than that in normal tissues. The incidence of distant metastasis was higher in patients with high expression of HOTAIR while their survival rate was lower than that of patients with low HOTAIR expression. Meanwhile, cell proliferation, invasion as well as migration ability of the cells in HOTAIR knockdown group was significantly decreased than those in the negative control group. QRT-PCR results showed that mRNA levels of miR-34a and HOTAIR in colon cancer tissues were negatively correlated. Besides, luciferase reporter gene assay revealed that overexpression of miR-34a significantly attenuated the luciferase activity of the wild-type HOTAIR vector group without attenuating the mutant HOTAIR vector group (p>0.05) In addition, the recovery experiment also found a mutual regulation between HOTAIR and miR-34a, together they could affect the malignant progression of colon cancer. |
Pubmed ID | 31298326 |
Year | 2019 |
Title | LncRNA HOTAIR promotes colon cancer development by down-regulating miRNA-34a |
External Links
Links for HOTAIR | GenBank HGNC NONCODE |
Links for colon cancer | OMIM COSMIC |