Basic Information
| LncRNA/CircRNA Name | ENST00000548900.1 |
| Synonyms | RP11-1143G9.4 |
| Region | GRCh38_12:69353493-69354225 |
| Ensemble | NA |
| Refseq | NA |
Classification Information
| Regulatory Mechanism | Biological Function | Clinical Application | |||
|---|---|---|---|---|---|
| TF | Immune | Survival | |||
| Enhancer | Apoptosis | apoptosis | Drug | ||
| Variant | Cell Growth | Circulating | |||
| MiRNA | EMT | Metastasis | |||
| Methylation | Coding Ability | Recurrence |
Cancer&Entry Information
| Cancer Name | gastric cancer |
| ICD-0-3 | C16 |
| Methods | Microarray, qPCR etc. |
| Sample | cell lines (SGC-7901, SGC-7901, AGS) |
| Expression Pattern | down-regulated |
| Function Description | To confirm the microarray results, we randomly selected two up-regulated lncRNAs (XLOC_000983, XLOC_005104) and six down-regulated lncRNAs (M18204.1, ENST00000548900.1, XLOC_006324, ENST00000420902.1, AK027145, HIX0023999) with log foldchanges > 2 to perform real-time PCR. The results of real-time PCR indicated a consistency of 87.5% between the real-time PCR results and the microarray results in SGC-7901 cells, these also showed a same result between PCR and microarray in AGS cells. |
| Pubmed ID | 28043146 |
| Year | 2017 |
| Title | Microarray analysis of long non-coding RNAs related to microRNA-148b in gastric cancer. |
External Links
| Links for ENST00000548900.1 | GenBank HGNC NONCODE |
| Links for gastric cancer | OMIM COSMIC |