Basic Information
| LncRNA/CircRNA Name | ENSG00000227588 |
| Synonyms | CNTN4-AS2 |
| Region | GRCh38_3:2110409-2144241 |
| Ensemble | ENSG00000227588 |
| Refseq | NR_046555 |
Classification Information
| Regulatory Mechanism | Biological Function | Clinical Application | |||
|---|---|---|---|---|---|
| TF | Immune | Survival | |||
| Enhancer | Apoptosis | Drug | |||
| Variant | Cell Growth | Circulating | |||
| MiRNA | EMT | Metastasis | |||
| Methylation | Coding Ability | Recurrence |
Cancer&Entry Information
| Cancer Name | breast cancer |
| ICD-0-3 | C50 |
| Methods | qPCR, SNP array etc. |
| Sample | breast cancer tissues |
| Expression Pattern | differential expression |
| Function Description | qPCR was used to selectively validate lincRNA-associated CNVs showing a predicted recurrence within 7 pairs. Of 33 qPCR reaction assays for 6 lincRNAs, 28 (85%) were in agreement with the prediction from Nexus. All six calls for sample BC-4 were detected while five calls for BC-5 were not detected. |
| Pubmed ID | 23267367 |
| Year | 2012 |
| Title | Identifying putative breast cancer-associated long intergenic non-coding RNA loci by high density SNP array analysis. |
External Links
| Links for ENSG00000227588 | GenBank HGNC NONCODE |
| Links for breast cancer | OMIM COSMIC |