Basic Information
LncRNA/CircRNA Name | AFAP1-AS1 |
Synonyms | NA |
Region | GRCh38_4:7754090-7778928 |
Ensemble | ENSG00000272620 |
Refseq | NR_026892 |
Classification Information
Regulatory Mechanism | Biological Function | Clinical Application | |||
---|---|---|---|---|---|
TF | Immune | Survival | |||
Enhancer | Apoptosis | apoptosis | Drug | ||
Variant | Cell Growth | Circulating | |||
MiRNA | EMT | Metastasis | |||
Methylation | Coding Ability | Recurrence |
Cancer&Entry Information
Cancer Name | breast cancer |
ICD-0-3 | C50 |
Methods | qPCR, in vitro knockdown |
Sample | breast cancer tissues, cell lines (MCF-7,SK-RB-3,MDA-MB-231??DA-MB-468) |
Expression Pattern | up-regulated |
Function Description | The expression of AFAP1-AS1 was up-regulated in human breast cancer tissue and associated with malignancy status, high expression of AFAP1-AS1 had a poor prognosis in breast cancer patients. AFAP1-AS1 expression was up-regulated in 4 breast cancer cell lines (MCF-7, SK-RB-3, MDA-MB-231and MDA-MB-468) compared with normal breast cell line HBL-100. MCF-7, the most up-regulation cancer cell, was used for following studies. The EMT-related protein expression was measured, and found AFAP1-AS1 knockdown increased the E-cadherin protein expression, while decreased the N-cadherin and Vimentin protein expression. AFAP1-AS1 knockdown can inhibit the proliferation, metastasis and promote apoptosis of MCF-7. However, the AFAP1 expression and actin filament integrity was not affected after AFAP1-AS1 knockdown. |
Pubmed ID | 29974352 |
Year | 2018 |
Title | Up-regulated lncRNA AFAP1-AS1 Indicates a Poor Prognosis and Promotes Carcinogenesis of Breast Cancer |
External Links
Links for AFAP1-AS1 | GenBank HGNC NONCODE |
Links for breast cancer | OMIM COSMIC |